Occurrences: |
view occurrences
id |
0811dcfd-7d9c-4d7e-b31c-863ceeb1b55a
|
scientificName |
Clytia linearis
|
AphiaID |
117370
|
eventDate |
2023-04-27
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
USP-24-01-02
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTGGGGCGCTGGTGGGACGGTCGGCCGCGAGGTCTGTTACTGTCTCTCCGTGCCATCACATTCTCGGAGACCCGTCGTGCACTTCGCTGTGCGCGGCGTGGGACTCGAGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Clytia linearis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117370",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Clytia_linearis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117370",
"accession": "AY789747.1.1693_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Clytia_linearis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117370",
"accession": "DQ064794.1.1691_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Clytia_linearis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117370",
"accession": "AY789748.1.1565_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
86.0
|
id |
d300b91c-063b-4e96-8885-f71624abeada
|
scientificName |
Clytia linearis
|
AphiaID |
117370
|
eventDate |
2023-04-27
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
USP-24-01-09
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTGGGGCGCTGGTGGGACGGTCGGCCGCGAGGTCTGTTACTGTCTCTCCGTGCCATCACATTCTCGGAGACCCGTCGTGCACTTCGCTGTGCGCGGCGTGGGACTCGAGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Clytia linearis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117370",
"confidence": 1
},
{
"method": "VSEARCH",
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"scientificNameID": "urn:lsid:marinespecies.org:taxname:117370",
"accession": "AY789747.1.1693_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
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"scientificNameID": "urn:lsid:marinespecies.org:taxname:117370",
"accession": "DQ064794.1.1691_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Clytia_linearis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117370",
"accession": "AY789748.1.1565_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
72.0
|
id |
a263299a-4320-4857-b90c-8590bf827954
|
scientificName |
Clytia
|
eventDate |
2023-04-27
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
USP-24-01-09
|
target_gene |
18S
|
DNA_sequence |
TTGTTGGTTTCTAAAACCGCAGTAATGATTAAGAGGGACAATTGGGGGCGTCCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTACGAAAGACGAACAACTGCGAAAGCATTCGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Clytia",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117030",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Clytia_linearis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117370",
"accession": "AY789747.1.1693_U",
"identity": 1,
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},
{
"method": "VSEARCH",
"scientificName": "Clytia_linearis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117370",
"accession": "DQ064794.1.1691_U",
"identity": 1,
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},
{
"method": "VSEARCH",
"scientificName": "Clytia_linearis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117370",
"accession": "AY789748.1.1565_U",
"identity": 1,
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},
{
"method": "VSEARCH",
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"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
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"accession": "KF962234.1.1714_U",
"identity": 1,
"query_cover": 0.9938
}
]
}
|
organismQuantity |
67.0
|
id |
bed8da61-ba00-45ee-9801-c73da0668110
|
scientificName |
Clytia
|
eventDate |
2023-04-27
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
USP-24-01-02
|
target_gene |
18S
|
DNA_sequence |
TTGTTGGTTTCTAAAACCGCAGTAATGATTAAGAGGGACAATTGGGGGCGTCCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTACGAAAGACGAACAACTGCGAAAGCATTCGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Clytia",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117030",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Clytia_linearis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117370",
"accession": "AY789747.1.1693_U",
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},
{
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},
{
"method": "VSEARCH",
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},
{
"method": "VSEARCH",
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"identity": 1,
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},
{
"method": "VSEARCH",
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"accession": "KF962234.1.1714_U",
"identity": 1,
"query_cover": 0.9938
}
]
}
|
organismQuantity |
64.0
|
id |
5ad87a2c-c730-4fd6-900d-24121a4a6f2f
|
scientificName |
Clytia
|
eventDate |
2023-04-27
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
USP-24-01-07
|
target_gene |
18S
|
DNA_sequence |
TTGTTGGTTTCTAAAACCGCAGTAATGATTAAGAGGGACAATTGGGGGCGTCCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTACGAAAGACGAACAACTGCGAAAGCATTCGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
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{
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},
{
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{
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},
{
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},
{
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},
{
"method": "VSEARCH",
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"identity": 1,
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}
]
}
|
organismQuantity |
20.0
|
id |
006fb769-0680-446f-8708-52e53ac5afa8
|
scientificName |
Clytia
|
eventDate |
2023-04-27
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
USP-24-01-08
|
target_gene |
18S
|
DNA_sequence |
TTGTTGGTTTCTAAAACCGCAGTAATGATTAAGAGGGACAATTGGGGGCGTCCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTACGAAAGACGAACAACTGCGAAAGCATTCGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
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"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
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{
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},
{
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},
{
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},
{
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{
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},
{
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}
]
}
|
organismQuantity |
1.0
|
id |
261fd0c3-02dc-4531-ab4e-8c60058215ee
|
scientificName |
Clytia
|
eventDate |
2023-04-27
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
USP-24-01-18
|
target_gene |
18S
|
DNA_sequence |
TTGTTGGTTTCTAAAACCGCAGTAATGATTAAGAGGGACAATTGGGGGCGTCCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTACGAAAGACGAACAACTGCGAAAGCATTCGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
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{
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{
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},
{
"method": "VSEARCH",
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"accession": "AY789748.1.1565_U",
"identity": 1,
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},
{
"method": "VSEARCH",
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"identity": 1,
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},
{
"method": "VSEARCH",
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"identity": 1,
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}
]
}
|
organismQuantity |
1.0
|
id |
5b2089fc-3bef-463b-ae66-09448b68e735
|
scientificName |
Clytia
|
eventDate |
2023-04-27
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
USP-24-01-20
|
target_gene |
18S
|
DNA_sequence |
TTGTTGGTTTCTAAAACCGCAGTAATGATTAAGAGGGACAATTGGGGGCGTCCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTACGAAAGACGAACAACTGCGAAAGCATTCGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Clytia",
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"confidence": 1
},
{
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},
{
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"identity": 1,
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},
{
"method": "VSEARCH",
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"accession": "AY789748.1.1565_U",
"identity": 1,
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},
{
"method": "VSEARCH",
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},
{
"method": "VSEARCH",
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"identity": 1,
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}
]
}
|
organismQuantity |
1.0
|
id |
1a736543-a227-4f7d-8f99-26d6a9fd0431
|
scientificName |
Clytia linearis
|
AphiaID |
117370
|
eventDate |
2023-04-27
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
USP-24-01-09
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTGGGGCGCTGGTGGGACGGTCGGCCGCGAGGTCTGTTACTGTCTCTCCGTGCCATCACATTCTCGGAGACCCGTCGTGCACTTCGCTGTTCGCGGCGTGGGACTCGAGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Clytia linearis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117370",
"confidence": 1
},
{
"method": "VSEARCH",
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"scientificNameID": "urn:lsid:marinespecies.org:taxname:117370",
"accession": "AY789747.1.1693_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
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"scientificNameID": "urn:lsid:marinespecies.org:taxname:117370",
"accession": "DQ064794.1.1691_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Clytia_linearis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117370",
"accession": "AY789748.1.1565_U",
"identity": 0.995,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
3.0
|
id |
2c328579-a099-40f9-9b30-527c22349f68
|
scientificName |
Clytia linearis
|
AphiaID |
117370
|
eventDate |
2023-04-27
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
USP-24-01-02
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTGGGGCGCTGGTGGGACGGTCGGCCGCGAGGTCTGTTACTGTCTCTCCGTGCCATCACATTCTCGGAGACCCGTCGTGCACTTCGCTGTTCGCGGCGTGGGACTCGAGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Clytia linearis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117370",
"confidence": 1
},
{
"method": "VSEARCH",
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"accession": "AY789747.1.1693_U",
"identity": 0.995,
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},
{
"method": "VSEARCH",
"scientificName": "Clytia_linearis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117370",
"accession": "DQ064794.1.1691_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Clytia_linearis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117370",
"accession": "AY789748.1.1565_U",
"identity": 0.995,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
3.0
|
id |
1163d2ab-7605-4902-a0fc-a865486a54f7
|
scientificName |
Clytia
|
eventDate |
2023-04-27
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
USP-24-01-02
|
target_gene |
18S
|
DNA_sequence |
TTGTTGGTTTCTAAAACCGCAGTAATGATTAAGAGGGACAATTGGGGGCGTCCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTGCGAAAGACGAACAACTGCGAAAGCATTCGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Clytia",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117030",
"confidence": 0.93
},
{
"method": "VSEARCH",
"scientificName": "Clytia_linearis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117370",
"accession": "AY789747.1.1693_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
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"scientificNameID": "urn:lsid:marinespecies.org:taxname:117370",
"accession": "DQ064794.1.1691_U",
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"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Clytia_linearis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117370",
"accession": "AY789748.1.1565_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Clytia_sp.",
"accession": "KF962233.1.1714_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Clytia_sp.",
"accession": "KF962234.1.1714_U",
"identity": 0.994,
"query_cover": 0.9938
}
]
}
|
organismQuantity |
23.0
|
id |
abb38d88-a255-41d1-9a49-5f4eca216f28
|
scientificName |
Clytia
|
eventDate |
2023-04-27
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
USP-24-01-09
|
target_gene |
18S
|
DNA_sequence |
TTGTTGGTTTCTAAAACCGCAGTAATGATTAAGAGGGACAATTGGGGGCGTCCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTGCGAAAGACGAACAACTGCGAAAGCATTCGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Clytia",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117030",
"confidence": 0.93
},
{
"method": "VSEARCH",
"scientificName": "Clytia_linearis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117370",
"accession": "AY789747.1.1693_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Clytia_linearis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117370",
"accession": "DQ064794.1.1691_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Clytia_linearis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117370",
"accession": "AY789748.1.1565_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Clytia_sp.",
"accession": "KF962233.1.1714_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Clytia_sp.",
"accession": "KF962234.1.1714_U",
"identity": 0.994,
"query_cover": 0.9938
}
]
}
|
organismQuantity |
4.0
|
|