PacMAN decision support system

Potential detection of Ciona savignyi in Fiji

Description:

Potential detection of Ciona savignyi with confidence medium on 2023-04-27 in material sample USP-24-01-05, marker 18S

Confidence:

medium

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Ciona savignyi
Chordata > Ascidiacea > Phlebobranchia > Cionidae
WoRMS: 250292

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

709.0

Names:

1

Occurrences:

view occurrences

id	262427bf-f1a7-48e2-92ad-3430229f177a
scientificName	Ciona savignyi
AphiaID	250292
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-05
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCATTCGTACTGTGCCGTTAGAGGTGAAATTCTTGGATCGGCGCAAGACGAACGACTGCGAAAGCATTTGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ciona savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "confidence": 0.96 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01030526.2.1210_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01059881.1228.2676_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_herdmanni", "accession": "FM244847.1.1607_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01041541.1.1348_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01045610.1.1202_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	709.0

id	7d06e99f-7d6c-4028-bcc5-7554b54aa7af
scientificName	Ciona savignyi
AphiaID	250292
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-01
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCATTCGTACTGTGCCGTTAGAGGTGAAATTCTTGGATCGGCGCAAGACGAACGACTGCGAAAGCATTTGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ciona savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "confidence": 0.96 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01030526.2.1210_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01059881.1228.2676_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_herdmanni", "accession": "FM244847.1.1607_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01041541.1.1348_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01045610.1.1202_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	224.0

id	95f96ba4-2162-43ea-9d6b-b913623dc164
scientificName	Ciona savignyi
AphiaID	250292
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-04
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCATTCGTACTGTGCCGTTAGAGGTGAAATTCTTGGATCGGCGCAAGACGAACGACTGCGAAAGCATTTGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ciona savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "confidence": 0.96 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01030526.2.1210_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01059881.1228.2676_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_herdmanni", "accession": "FM244847.1.1607_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01041541.1.1348_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01045610.1.1202_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	189.0

id	7a8920d3-6d43-4ee4-9a87-fabaa8e8e1db
scientificName	Ciona savignyi
AphiaID	250292
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-07
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCATTCGTACTGTGCCGTTAGAGGTGAAATTCTTGGATCGGCGCAAGACGAACGACTGCGAAAGCATTTGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ciona savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "confidence": 0.96 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01030526.2.1210_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01059881.1228.2676_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_herdmanni", "accession": "FM244847.1.1607_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01041541.1.1348_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01045610.1.1202_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	118.0

id	053fe7bb-ee0c-48ba-ba09-d9296cedf98b
scientificName	Ciona savignyi
AphiaID	250292
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-10
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCATTCGTACTGTGCCGTTAGAGGTGAAATTCTTGGATCGGCGCAAGACGAACGACTGCGAAAGCATTTGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ciona savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "confidence": 0.96 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01030526.2.1210_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01059881.1228.2676_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_herdmanni", "accession": "FM244847.1.1607_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01041541.1.1348_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01045610.1.1202_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	106.0

id	c7bf0ac4-7e5c-453c-b84f-177e2caf6558
scientificName	Ciona savignyi
AphiaID	250292
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-11
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCATTCGTACTGTGCCGTTAGAGGTGAAATTCTTGGATCGGCGCAAGACGAACGACTGCGAAAGCATTTGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ciona savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "confidence": 0.96 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01030526.2.1210_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01059881.1228.2676_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_herdmanni", "accession": "FM244847.1.1607_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01041541.1.1348_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01045610.1.1202_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	45.0

id	31e3072a-aabc-45fe-8ba6-451603e5fec3
scientificName	Ciona savignyi
AphiaID	250292
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-02
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCATTCGTACTGTGCCGTTAGAGGTGAAATTCTTGGATCGGCGCAAGACGAACGACTGCGAAAGCATTTGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ciona savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "confidence": 0.96 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01030526.2.1210_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01059881.1228.2676_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_herdmanni", "accession": "FM244847.1.1607_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01041541.1.1348_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01045610.1.1202_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	21.0

id	c22e0de5-89f4-4500-b8e6-e8d1fd8247bf
scientificName	Ciona savignyi
AphiaID	250292
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-12
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCATTCGTACTGTGCCGTTAGAGGTGAAATTCTTGGATCGGCGCAAGACGAACGACTGCGAAAGCATTTGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ciona savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "confidence": 0.96 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01030526.2.1210_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01059881.1228.2676_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_herdmanni", "accession": "FM244847.1.1607_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01041541.1.1348_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01045610.1.1202_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	7.0

id	6485fa0b-6a77-4893-a9b5-b184d51ed838
scientificName	Ciona savignyi
AphiaID	250292
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-13
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCATTCGTACTGTGCCGTTAGAGGTGAAATTCTTGGATCGGCGCAAGACGAACGACTGCGAAAGCATTTGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ciona savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "confidence": 0.96 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01030526.2.1210_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01059881.1228.2676_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_herdmanni", "accession": "FM244847.1.1607_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01041541.1.1348_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01045610.1.1202_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	6.0

id	0b6ffe0d-453b-4dc5-a1c4-8175a64b5bd6
scientificName	Ciona savignyi
AphiaID	250292
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-06
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCATTCGTACTGTGCCGTTAGAGGTGAAATTCTTGGATCGGCGCAAGACGAACGACTGCGAAAGCATTTGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ciona savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "confidence": 0.96 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01030526.2.1210_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01059881.1228.2676_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_herdmanni", "accession": "FM244847.1.1607_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01041541.1.1348_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01045610.1.1202_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	3.0

id	ece543fb-d1ef-4bc9-94d5-787ea1d652f4
scientificName	Ciona savignyi
AphiaID	250292
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-16
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCATTCGTACTGTGCCGTTAGAGGTGAAATTCTTGGATCGGCGCAAGACGAACGACTGCGAAAGCATTTGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ciona savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "confidence": 0.96 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01030526.2.1210_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01059881.1228.2676_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_herdmanni", "accession": "FM244847.1.1607_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01041541.1.1348_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01045610.1.1202_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	2.0

id	29521adb-56c7-4923-aded-792f8b187b75
scientificName	Ciona savignyi
AphiaID	250292
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-03
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCATTCGTACTGTGCCGTTAGAGGTGAAATTCTTGGATCGGCGCAAGACGAACGACTGCGAAAGCATTTGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ciona savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "confidence": 0.96 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01030526.2.1210_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01059881.1228.2676_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_herdmanni", "accession": "FM244847.1.1607_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01041541.1.1348_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01045610.1.1202_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	1.0

id	b41110a5-988d-425e-b9dc-f4ac28d4ea03
scientificName	Ciona savignyi
AphiaID	250292
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-19
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCATTCGTACTGTGCCGTTAGAGGTGAAATTCTTGGATCGGCGCAAGACGAACGACTGCGAAAGCATTTGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ciona savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "confidence": 0.96 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01030526.2.1210_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01059881.1228.2676_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_herdmanni", "accession": "FM244847.1.1607_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01041541.1.1348_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01045610.1.1202_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	1.0

id	e88fd7a7-72d6-46fc-9e08-b5b9216f9f7f
scientificName	Ciona savignyi
AphiaID	250292
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-20
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCATTCGTACTGTGCCGTTAGAGGTGAAATTCTTGGATCGGCGCAAGACGAACGACTGCGAAAGCATTTGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ciona savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "confidence": 0.96 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01030526.2.1210_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01059881.1228.2676_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_herdmanni", "accession": "FM244847.1.1607_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01041541.1.1348_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ciona_savignyi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250292", "accession": "AACT01045610.1.1202_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	1.0

Ciona savignyi in Fiji

Status

Ciona savignyi does not have an offial status in Fiji.

Notes

No notes found.