PacMAN decision support system

Potential detection of Bougainvillia muscus in Fiji

Description:

Potential detection of Bougainvillia muscus with confidence medium on 2022-11-23 in material sample S88, marker 18S

Confidence:

medium

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Bougainvillia muscus
Cnidaria > Hydrozoa > Anthoathecata > Bougainvilliidae
WoRMS: 117328

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

493.0

Names:

Occurrences:

view occurrences

id	09c7fbd2-75ad-41c4-8a24-387e77360fd1
scientificName	Bougainvillia
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S88
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGACGGGCCAGTTGGTCCGCCGCAAGGTGTGTACTGACTGGTCTGTTCTTCTTCGCAAAGACTGCGTGTGCTCTTTATTGAGTGTGCGTAGGATTTACGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Bougainvillia sp.", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_muscus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117328", "accession": "FJ550582.1.1663_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_sp.", "accession": "AF358093.1.1820_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_sp.", "accession": "KF962203.1.1680_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_sp.", "accession": "KF962204.1.1680_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_sp.", "accession": "KF962205.1.1680_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	493.0

id	4ba2503f-2eb3-48a3-8357-3b4668103b61
scientificName	Bougainvillia
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S76
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGACGGGCCAGTTGGTCCGCCGCAAGGTGTGTACTGACTGGTCTGTTCTTCTTCGCAAAGACTGCGTGTGCTCTTTATTGAGTGTGCGTAGGATTTACGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Bougainvillia sp.", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_muscus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117328", "accession": "FJ550582.1.1663_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_sp.", "accession": "AF358093.1.1820_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_sp.", "accession": "KF962203.1.1680_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_sp.", "accession": "KF962204.1.1680_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_sp.", "accession": "KF962205.1.1680_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	131.0

id	2802359c-e2e2-46e8-9ae5-dfe35de9bc44
scientificName	Bougainvillia
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S70
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGACGGGCCAGTTGGTCCGCCGCAAGGTGTGTACTGACTGGTCTGTTCTTCTTCGCAAAGACTGCGTGTGCTCTTTATTGAGTGTGCGTAGGATTTACGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Bougainvillia sp.", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_muscus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117328", "accession": "FJ550582.1.1663_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_sp.", "accession": "AF358093.1.1820_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_sp.", "accession": "KF962203.1.1680_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_sp.", "accession": "KF962204.1.1680_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_sp.", "accession": "KF962205.1.1680_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	37.0

id	d2849056-baea-4a1a-9dc3-b7adec153182
scientificName	Bougainvillia
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S71
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGACGGGCCAGTTGGTCCGCCGCAAGGTGTGTACTGACTGGTCTGTTCTTCTTCGCAAAGACTGCGTGTGCTCTTTATTGAGTGTGCGTAGGATTTACGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Bougainvillia sp.", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_muscus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117328", "accession": "FJ550582.1.1663_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_sp.", "accession": "AF358093.1.1820_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_sp.", "accession": "KF962203.1.1680_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_sp.", "accession": "KF962204.1.1680_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_sp.", "accession": "KF962205.1.1680_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	16.0

id	4508504a-ccec-4fed-bd15-342491c97f23
scientificName	Bougainvillia
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S73
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGACGGGCCAGTTGGTCCGCCGCAAGGTGTGTACTGACTGGTCTGTTCTTCTTCGCAAAGACTGCGTGTGCTCTTTATTGAGTGTGCGTAGGATTTACGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Bougainvillia sp.", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_muscus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117328", "accession": "FJ550582.1.1663_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_sp.", "accession": "AF358093.1.1820_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_sp.", "accession": "KF962203.1.1680_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_sp.", "accession": "KF962204.1.1680_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_sp.", "accession": "KF962205.1.1680_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	5.0

Bougainvillia muscus does not have an offial status in Fiji.

No notes found.