PacMAN decision support system

Potential detection of Halocynthia roretzi in Fiji

Description:

Potential detection of Halocynthia roretzi with confidence low on 2022-11-23 in material sample S88, marker 18S

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Halocynthia roretzi
Chordata > Ascidiacea > Stolidobranchia > Pyuridae
WoRMS: 250680

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

7181.0

Names:

7

Occurrences:

view occurrences

id	388c4d85-4141-4a0f-8734-ddb27996da50
scientificName	Pyura
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S88
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	7181.0

id	20831548-5e30-42a5-9a92-01306007db25
scientificName	Pyura
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S76
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	171.0

id	f323d60f-50a2-4a32-962c-6055d9643e51
scientificName	Pyura
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S73
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	94.0

id	73517a2f-56c8-4c40-ac77-8ec6fcd33f45
scientificName	Pyura
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S70
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	89.0

id	0d41d2c7-cf13-4d1e-8f10-d134da5629e9
scientificName	Pyura
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S71
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	23.0

id	54f0ee3a-3558-45ca-a9a7-902ff6d3a921
scientificName	Pyura
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S72
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	2.0

id	97c88647-95c9-47e3-abc0-4469f3c74e14
scientificName	Pyura
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S84
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	1.0

id	d7578f9b-1adf-40e6-a779-aeabca10e192
scientificName	Pyura
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S86
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	1.0

Halocynthia roretzi in Fiji

Status

Halocynthia roretzi does not have an offial status in Fiji.

Notes

No notes found.