PacMAN decision support system

Potential detection of Perophora japonica in Fiji

Description:

Potential detection of Perophora japonica with confidence medium on 2022-10-03 in material sample S80, marker 18S

Confidence:

medium

Risk:

medium view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Perophora japonica
Chordata > Ascidiacea > Phlebobranchia > Perophoridae
WoRMS: 103758

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

311.0

Names:

2

Occurrences:

view occurrences

id	b5ab61ea-c892-4030-8dd5-2ed013849482
scientificName	Perophora japonica
AphiaID	103758
eventDate	2022-10-03
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S80
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGCTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGACCTGGCCTTACCTTCGGTTCCCCGCCGGTGCTCTTGACTGAGTGTCGGCGGCGGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Perophora japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "confidence": 0.94 }, { "method": "VSEARCH", "scientificName": "Perophora_japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "accession": "AB499607.1.1752_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_herdmanni", "accession": "FM244847.1.1607_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Perophora_sagamiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250618", "accession": "AB104873.1.1720_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662244.1.1230_U", "identity": 0.986, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662235.1.1233_U", "identity": 0.986, "query_cover": 0.9952 } ] }
organismQuantity	311.0

id	28cf4095-b725-40e2-b001-31ac279cc2c2
scientificName	Perophora japonica
AphiaID	103758
eventDate	2022-10-03
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S87
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGCTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGACCTGGCCTTACCTTCGGTTCCCCGCCGGTGCTCTTGACTGAGTGTCGGCGGCGGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Perophora japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "confidence": 0.94 }, { "method": "VSEARCH", "scientificName": "Perophora_japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "accession": "AB499607.1.1752_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_herdmanni", "accession": "FM244847.1.1607_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Perophora_sagamiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250618", "accession": "AB104873.1.1720_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662244.1.1230_U", "identity": 0.986, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662235.1.1233_U", "identity": 0.986, "query_cover": 0.9952 } ] }
organismQuantity	59.0

id	8db15e4b-e978-4c86-848a-0b0871b9e6b6
scientificName	Perophora japonica
AphiaID	103758
eventDate	2022-10-03
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S74
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGCTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGACCTGGCCTTACCTTCGGTTCCCCGCCGGTGCTCTTGACTGAGTGTCGGCGGCGGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Perophora japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "confidence": 0.94 }, { "method": "VSEARCH", "scientificName": "Perophora_japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "accession": "AB499607.1.1752_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_herdmanni", "accession": "FM244847.1.1607_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Perophora_sagamiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250618", "accession": "AB104873.1.1720_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662244.1.1230_U", "identity": 0.986, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662235.1.1233_U", "identity": 0.986, "query_cover": 0.9952 } ] }
organismQuantity	11.0

id	a2205a38-e73d-4341-a770-cc31a41446e1
scientificName	Perophora japonica
AphiaID	103758
eventDate	2022-10-03
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S77
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGCTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGACCTGGCCTTACCTTCGGTTCCCCGCCGGTGCTCTTGACTGAGTGTCGGCGGCGGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Perophora japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "confidence": 0.94 }, { "method": "VSEARCH", "scientificName": "Perophora_japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "accession": "AB499607.1.1752_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_herdmanni", "accession": "FM244847.1.1607_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Perophora_sagamiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250618", "accession": "AB104873.1.1720_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662244.1.1230_U", "identity": 0.986, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662235.1.1233_U", "identity": 0.986, "query_cover": 0.9952 } ] }
organismQuantity	10.0

id	48b66750-1fe4-453e-8315-d79f6f6c3924
scientificName	Perophora japonica
AphiaID	103758
eventDate	2022-10-03
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S78
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGCTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGACCTGGCCTTACCTTCGGTTCCCCGCCGGTGCTCTTGACTGAGTGTCGGCGGCGGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Perophora japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "confidence": 0.94 }, { "method": "VSEARCH", "scientificName": "Perophora_japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "accession": "AB499607.1.1752_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_herdmanni", "accession": "FM244847.1.1607_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Perophora_sagamiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250618", "accession": "AB104873.1.1720_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662244.1.1230_U", "identity": 0.986, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662235.1.1233_U", "identity": 0.986, "query_cover": 0.9952 } ] }
organismQuantity	8.0

id	124f8c44-43a1-42cf-9720-7586c5448ecf
scientificName	Perophora japonica
AphiaID	103758
eventDate	2022-10-03
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S80
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGACCTGGCCTTACCTTCGGTTCCCCGCCGGTGCTCTTGACTGAGTGTCGGCGGCGGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Perophora japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "confidence": 0.83 }, { "method": "VSEARCH", "scientificName": "Perophora_japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "accession": "AB499607.1.1752_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_herdmanni", "accession": "FM244847.1.1607_U", "identity": 0.986, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Perophora_sagamiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250618", "accession": "AB104873.1.1720_U", "identity": 0.986, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662244.1.1230_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662235.1.1233_U", "identity": 0.976, "query_cover": 0.9952 } ] }
organismQuantity	7.0

id	23a2e362-9ed5-4649-9d08-d819eec3e2a0
scientificName	Perophora japonica
AphiaID	103758
eventDate	2022-10-03
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S80
target_gene	18S
DNA_sequence	TGACGCGGTTATTCCAGCTCCAAAAGTGTATATTTAAGTTGCTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGCTGGTCCGTCGCAAGGCGTGCACTGGCCGACCTGGCCTTACCTTCGGTTCCCCGCCGGTGCTCTTGACTGAGTGTCGACGGCGGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Perophora japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "confidence": 0.81 }, { "method": "VSEARCH", "scientificName": "Perophora_japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "accession": "AB499607.1.1752_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_herdmanni", "accession": "FM244847.1.1607_U", "identity": 0.971, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Perophora_sagamiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250618", "accession": "AB104873.1.1720_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	4.0

Perophora japonica in Fiji

Status

Perophora japonica does not have an offial status in Fiji.

Notes

No notes found.