identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Copula sivickisi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:287144",
"confidence": 0.86
},
{
"method": "VSEARCH",
"scientificName": "Copula_sivickisi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:287144",
"accession": "AF358110.1.1816_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Copula_sivickisi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:287144",
"accession": "GQ849087.1.1722_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Tripedalia_cystophora",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:291241",
"accession": "GQ849088.1.1794_U",
"identity": 0.99,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Tripedalia_cystophora",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:291241",
"accession": "L10829.1.1802_U",
"identity": 0.99,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Tripedalia_cystophora",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:291241",
"accession": "EU272637.1.1706_U",
"identity": 0.99,
"query_cover": 0.9952
}
]
}
|