Occurrences: |
view occurrences
id |
356c7430-44aa-477c-9a1a-17c67fd6599e
|
scientificName |
Canarium mutabile
|
AphiaID |
531880
|
eventDate |
2022-11-23
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S162
|
target_gene |
COI
|
DNA_sequence |
TTTAGCAGGAAACTTAGCTCATGCTGGAGGCTCAGTTGATCTAGCTATTTTTTCTCTGCACTTAGCGGGTGTGTCCTCTATTTTAGGTGCGGTAAATTTTATCACTACAATTATTAATATACGATGACGAGGGATGCAATTTGAGCGTCTTCCTCTTTTTGTATGATCGGTAAAAATTACTGCTGTACTTCTATTACTTTCTTTGCCTGTTCTAGCTGGGGCTATTACAATGCTTTTAACAGATCGAAATTTTAATACTGCATTCTTTGATCCTGCTGGAGGGGGGGATCCTATTTTGTACCAACATTTGTTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Canarium mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Canarium_mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"accession": "DQ525218",
"identity": 0.993,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Canarium_mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"accession": "MN389052",
"identity": 0.981,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
10.0
|
id |
2ef420ee-d6ed-4dcf-8e6e-c8bb3e74c203
|
scientificName |
Canarium mutabile
|
AphiaID |
531880
|
eventDate |
2022-11-23
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S162
|
target_gene |
COI
|
DNA_sequence |
TTTAGCAGGAAACTTAGCTCATGCTGGAGGGTCAGTTGATCTAGCTATTTTTTCTCTGCACTTAGCGGGTGTGTCCTCTATTTTAGGTGCGGTAAATTTTATTACTACAATTATTAATATACGATGACGAGGGATGCAATTTGAACGTCTTCCTCTTTTTGTCTGATCGGTAAAAATTACTGCTGTACTTCTATTACTTTCTTTGCCTGTTCTAGCTGGGGCTATTACAATGCTTTTAACAGATCGAAATTTTAATACTGCATTCTTTGATCCTGCTGGAGGGGGGGATCCTATTTTGTACCAACATTTGTTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Canarium mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Canarium_mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"accession": "MN389052",
"identity": 0.99,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Canarium_mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"accession": "DQ525218",
"identity": 0.987,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
202.0
|
id |
314baf08-e93f-4b7c-98d6-5767c1d7047d
|
scientificName |
Canarium mutabile
|
AphiaID |
531880
|
eventDate |
2022-11-23
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S162
|
target_gene |
COI
|
DNA_sequence |
TTTAGCAGGAAACTTAGCTCATGCTGGAGGGTCAGTTGATCTAGCTATTTTTTCTCTGCACTTAGCGGGTGTGTCCTCTATTTTAGGTGCGGTAAATTTTATTACTACAATTATTAATATACGATGACGAGGGATGCAATTTGAACGTCTTCCTCTTTTTGTCTGATCGGTAAAAATTACTGCTGTACTTCTATTACTTTCTTTGCCTGTTTTAGCTGGGGCTATTACAATGCTTTTAACAGATCGAAATTTTAATACTGCATTCTTTGATCCTGCTGGAGGGGGGGATCCTATTTTGTACCAACATTTGTTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Canarium mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Canarium_mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"accession": "DQ525218",
"identity": 0.99,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Canarium_mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"accession": "MN389052",
"identity": 0.987,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
5.0
|
id |
1cde2a5f-e23f-4b38-8d21-b901929a5a8b
|
scientificName |
Canarium mutabile
|
AphiaID |
531880
|
eventDate |
2022-11-23
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S162
|
target_gene |
COI
|
DNA_sequence |
TTTAGCAGGAAACTTAGCTCATGCTGGAGGGTCAGTTGATCTAGCTATTTTTTCTCTGCACTTAGCGGGTGTGTCTTCTATTTTAGGTGCGGTAAATTTTATCACTACAATTATTAATATACGATGACGAGGGATGCAATTCGAACGTCTTCCTCTCTTTGTCTGATCGGTAAAAATTACTGCTGTACTTCTATTACTTTCTTTGCCTGTTCTAGCTGGGGCTATTACAATGCTTTTAACAGATCGAAATTTTAATACTGCATTCTTTGATCCTGCTGGAGGGGGGGATCCTATTTTGTACCAACATTTGTTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Canarium mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Canarium_mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"accession": "MN389052",
"identity": 0.984,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Canarium_mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"accession": "DQ525218",
"identity": 0.974,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
204.0
|
id |
146b4ee5-27d9-443e-bc3d-9f47aba35526
|
scientificName |
Canarium mutabile
|
AphiaID |
531880
|
eventDate |
2022-11-23
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S162
|
target_gene |
COI
|
DNA_sequence |
TTTAGCAGGAAATTTAGCTCATGCTGGAGGCTCAGTTGATCTAGCTATTTTTTCTCTTCACTTAGCGGGTGTGTCCTCTATTTTAGGTGCGGTAAATTTTATCACTACAATTATCAATATACGATGACGAGGGATGCAATTTGAACGTCTTCCTCTTTTTGTGTGATCGGTAAAAATTACTGCTGTACTTCTATTACTTTCTTTGCCTGTTCTAGCTGGGGCTATTACAATGCTTTTAACAGATCGAAATTTTAATACTGCATTCTTTGATCCTGCTGGAGGGGGGGATCCTATTTTGTACCAACATTTGTTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Canarium mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Canarium_mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"accession": "DQ525218",
"identity": 0.977,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Canarium_mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"accession": "MN389052",
"identity": 0.974,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
54.0
|
id |
9ed43382-3cc9-4b9a-98db-2dc48f6540bb
|
scientificName |
Canarium mutabile
|
AphiaID |
531880
|
eventDate |
2022-11-23
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S162
|
target_gene |
COI
|
DNA_sequence |
TTTAGCAGGAAACTTAGCTCATGCTGGAGGGTCAGTTGATCTAGCTATTTTTTCTCTGCACTTAGCGGGTGTGTCTTCTATTTTAGGTGCGGTAAATTTTATCACTACAATTATTAATATACGATGACGAGGGATGCAATTCGAACGTCTTCCTCTCTTTGTCTGATCGGTAAAAATTACTGCTGTACTTCTATTACTTTCTTTGCCTGTTTTAGCTGGGGCTATTACAATGCTTTTAACAGATCGAAATTTTAATACTGCATTCTTTGATCCTGCTGGAGGGGGGGATCCTATTTTGTACCAACATTTGTTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Canarium mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Canarium_mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"accession": "MN389052",
"identity": 0.981,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Canarium_mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"accession": "DQ525218",
"identity": 0.977,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
2.0
|
id |
806b53f7-d8ae-4c24-b4af-97f49463f1b5
|
scientificName |
Canarium mutabile
|
AphiaID |
531880
|
eventDate |
2022-11-23
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S162
|
target_gene |
COI
|
DNA_sequence |
TTTAGCAGGAAACTTAGCTCATGCTGGAGGGTCAGTTGATCTAGCTATTTTTTCTCTGCACTTAGCGGGTGTGTCTTCTATTTTAGGTGCGGTAAATTTTATCACTACAATTATTAATATACGATGACGAGGAATGCAATTCGAACGTCTTCCTCTCTTTGTCTGATCGGTAAAAATTACTGCTGTACTTCTATTACTTTCTTTGCCTGTTCTAGCTGGGGCTATTACAATGCTTTTAACAGATCGAAATTTTAATACTGCATTCTTTGATCCTGCTGGAGGGGGGGATCCTATTTTGTACCAACATTTGTTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Canarium mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Canarium_mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"accession": "MN389052",
"identity": 0.981,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Canarium_mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"accession": "DQ525218",
"identity": 0.97,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
1.0
|
|