Occurrences: |
view occurrences
id |
e153a574-1efa-4a18-9b0d-8f5100a5baf6
|
scientificName |
Phallusia nigra
|
AphiaID |
103725
|
eventDate |
2022-11-23
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S88
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268455.1.1746_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268456.1.1746_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268457.1.1758_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268458.1.1766_U",
"identity": 1,
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},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268459.1.1757_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
5251.0
|
id |
da53ecef-6e9c-4be1-9b9f-3aec741e4c8b
|
scientificName |
Phallusia nigra
|
AphiaID |
103725
|
eventDate |
2022-11-23
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S76
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268455.1.1746_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268456.1.1746_U",
"identity": 1,
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},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268457.1.1758_U",
"identity": 1,
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},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268458.1.1766_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268459.1.1757_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
40.0
|
id |
2b96b6ba-9d59-434d-a1a3-a3f1ec630a5c
|
scientificName |
Phallusia nigra
|
AphiaID |
103725
|
eventDate |
2022-11-23
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S71
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268455.1.1746_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268456.1.1746_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268457.1.1758_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268458.1.1766_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268459.1.1757_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
13.0
|
id |
7f10e5ff-d799-488a-a3c4-b5f48c1779a6
|
scientificName |
Phallusia nigra
|
AphiaID |
103725
|
eventDate |
2022-11-23
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S70
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268455.1.1746_U",
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},
{
"method": "VSEARCH",
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},
{
"method": "VSEARCH",
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},
{
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},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268459.1.1757_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
8.0
|
id |
6e3a883f-438c-462f-94b4-ecd6e9725dee
|
scientificName |
Phallusia nigra
|
AphiaID |
103725
|
eventDate |
2022-11-23
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S73
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268455.1.1746_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268456.1.1746_U",
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},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
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},
{
"method": "VSEARCH",
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"accession": "KF268458.1.1766_U",
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},
{
"method": "VSEARCH",
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}
]
}
|
organismQuantity |
5.0
|
id |
2cfa0093-e34c-4d99-8aa2-4c935b63de3c
|
scientificName |
Phallusia nigra
|
AphiaID |
103725
|
eventDate |
2022-11-23
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S72
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
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{
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},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268457.1.1758_U",
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},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268458.1.1766_U",
"identity": 1,
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},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268459.1.1757_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
2.0
|
id |
843067c2-21a1-4083-a1ba-647b332326ee
|
scientificName |
Phallusia nigra
|
AphiaID |
103725
|
eventDate |
2022-11-23
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S88
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"confidence": 0.81
},
{
"method": "VSEARCH",
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},
{
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},
{
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},
{
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},
{
"method": "VSEARCH",
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"accession": "KF268459.1.1757_U",
"identity": 0.99,
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}
]
}
|
organismQuantity |
16.0
|
id |
153630ec-8e39-4042-9264-5e2cc649753b
|
scientificName |
Phallusia nigra
|
AphiaID |
103725
|
eventDate |
2022-11-23
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S76
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"confidence": 0.81
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
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},
{
"method": "VSEARCH",
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},
{
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"accession": "KF268457.1.1758_U",
"identity": 0.99,
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},
{
"method": "VSEARCH",
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"accession": "KF268458.1.1766_U",
"identity": 0.99,
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},
{
"method": "VSEARCH",
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"accession": "KF268459.1.1757_U",
"identity": 0.99,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
3.0
|
id |
a3b7be32-3271-49cb-8387-0e3cc90fc8b9
|
scientificName |
Phallusia nigra
|
AphiaID |
103725
|
eventDate |
2022-11-23
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S73
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"confidence": 0.81
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268455.1.1746_U",
"identity": 0.99,
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},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268456.1.1746_U",
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},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268457.1.1758_U",
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},
{
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"accession": "KF268458.1.1766_U",
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},
{
"method": "VSEARCH",
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"accession": "KF268459.1.1757_U",
"identity": 0.99,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
2.0
|
id |
7f5e1158-06da-4a06-a1f5-81cf916ed03f
|
scientificName |
Phallusia nigra
|
AphiaID |
103725
|
eventDate |
2022-11-23
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S86
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"confidence": 0.81
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268455.1.1746_U",
"identity": 0.99,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268456.1.1746_U",
"identity": 0.99,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268457.1.1758_U",
"identity": 0.99,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268458.1.1766_U",
"identity": 0.99,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268459.1.1757_U",
"identity": 0.99,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
1.0
|
id |
ee8bc12b-c2a6-44cd-93b7-7bf19af586c4
|
scientificName |
Phallusia nigra
|
AphiaID |
103725
|
eventDate |
2022-11-23
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S88
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGGCTCGCCTGAATAATGGTGCATGGAATAATGGAATAGGACCTCGGTTCTATTTTGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGA
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"confidence": 0.93
}
]
}
|
organismQuantity |
85.0
|
id |
30c27c10-a730-48ca-9283-18e6f6a84f9e
|
scientificName |
Phallusia nigra
|
AphiaID |
103725
|
eventDate |
2022-11-23
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S88
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGGCTCGCCTGAATAATGGTGCATGGAATAATGGAATAGGACCTCGGTTCTATTTTGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACGGACGGGGGCATTCGTACTGTGCCGTTAGAGGTGAAATTCTTGGATCGGCGCAAGACGAACGACTGCGAAAGCATTTGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"confidence": 0.99
}
]
}
|
organismQuantity |
74.0
|
|