| Occurrences: |
view occurrences
| id |
219c3fd5-9e0d-45e0-a9be-8c3549e46ab6
|
| scientificName |
Scarus ghobban
|
| AphiaID |
219127
|
| eventDate |
2023-05-31
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| eventID |
SUVA1_20230531_WA
|
| materialSampleID |
USP-24-01-122
|
| target_gene |
COI
|
| DNA_sequence |
TCTAGCAGGGAATCTTGCACACGCAGGGGCATCCGTTGACCTAACAATTTTCTCTCTTCACCTAGCAGGGATTTCATCTATTCTAGGCGCAATCAACTTTATCACAACCATCATTAACATGAAACCGCCTGCCATCTCCCAATACCAAACGCCCCTATTCGTATGAGCTGTTTTAATTACTGCCGTGCTTCTTCTCCTCTCGCTCCCTGTCCTTGCTGCAGGAATCACAATGCTTCTCACAGATCGAAATCTAAACACTACCTTCTTTGACCCTGCAGGCGGAGGAGACCCGATTCTCTATCAACACCTCTTC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Scarus ghobban",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:219127",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Scarus ghobban",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:219127",
"accession": "EF609452",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Scarus ghobban",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:219127",
"accession": "GU674392",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Scarus ghobban",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:219127",
"accession": "GU674404",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Scarus ghobban",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:219127",
"accession": "KC970419",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Scarus ghobban",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:219127",
"accession": "MK765083",
"identity": 1,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
13.0
|
| id |
5d716d48-7051-4578-a682-3d1459774905
|
| scientificName |
Scarus ghobban
|
| AphiaID |
219127
|
| eventDate |
2023-05-31
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| eventID |
SUVA1_20230531_WB
|
| materialSampleID |
USP-24-01-123
|
| target_gene |
COI
|
| DNA_sequence |
TCTAGCAGGGAATCTTGCACACGCAGGGGCATCCGTTGACCTAACAATTTTCTCTCTTCACCTAGCAGGGATTTCATCTATTCTAGGCGCAATCAACTTTATCACAACCATCATTAACATGAAACCGCCTGCCATCTCCCAATACCAAACGCCCCTATTCGTATGAGCTGTTTTAATTACTGCCGTGCTTCTTCTCCTCTCGCTCCCTGTCCTTGCTGCAGGAATCACAATGCTTCTCACAGATCGAAATCTAAACACTACCTTCTTTGACCCTGCAGGCGGAGGAGACCCGATTCTCTATCAACACCTCTTC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Scarus ghobban",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:219127",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Scarus ghobban",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:219127",
"accession": "EF609452",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Scarus ghobban",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:219127",
"accession": "GU674392",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Scarus ghobban",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:219127",
"accession": "GU674404",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Scarus ghobban",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:219127",
"accession": "KC970419",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Scarus ghobban",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:219127",
"accession": "MK765083",
"identity": 1,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
1.0
|
|