Occurrences: |
view occurrences
id |
24788914-3dfb-4702-b3f1-8c8141420d74
|
scientificName |
Phallusia nigra
|
AphiaID |
103725
|
eventDate |
2022-10-03
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
S80
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268455.1.1746_U",
"identity": 1,
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},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268456.1.1746_U",
"identity": 1,
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},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268457.1.1758_U",
"identity": 1,
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},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268458.1.1766_U",
"identity": 1,
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},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268459.1.1757_U",
"identity": 1,
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}
]
}
|
organismQuantity |
23646.0
|
id |
f680bcb4-0735-4eed-b248-60a90505b431
|
scientificName |
Phallusia nigra
|
AphiaID |
103725
|
eventDate |
2022-10-03
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
S87
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268455.1.1746_U",
"identity": 1,
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},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268456.1.1746_U",
"identity": 1,
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},
{
"method": "VSEARCH",
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},
{
"method": "VSEARCH",
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"accession": "KF268458.1.1766_U",
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},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268459.1.1757_U",
"identity": 1,
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}
]
}
|
organismQuantity |
84.0
|
id |
a1aa57c4-44ad-4f26-859c-73bfc0221f60
|
scientificName |
Phallusia nigra
|
AphiaID |
103725
|
eventDate |
2022-10-03
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
S77
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
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"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268455.1.1746_U",
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},
{
"method": "VSEARCH",
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},
{
"method": "VSEARCH",
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"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268457.1.1758_U",
"identity": 1,
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},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268458.1.1766_U",
"identity": 1,
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},
{
"method": "VSEARCH",
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"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268459.1.1757_U",
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}
]
}
|
organismQuantity |
82.0
|
id |
8b9fcfab-175b-4b58-8c66-766856c4c2d3
|
scientificName |
Phallusia nigra
|
AphiaID |
103725
|
eventDate |
2022-10-03
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
S79
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
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},
{
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{
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{
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{
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}
]
}
|
organismQuantity |
61.0
|
id |
d513feba-ed04-4a8a-86a1-d1a5badbd228
|
scientificName |
Phallusia nigra
|
AphiaID |
103725
|
eventDate |
2022-10-03
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
S74
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
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"annotations": [
{
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"scientificName": "Phallusia nigra",
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"confidence": 1
},
{
"method": "VSEARCH",
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{
"method": "VSEARCH",
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{
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{
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]
}
|
organismQuantity |
56.0
|
id |
e12cfdf1-adb5-4fec-be15-8f9577bc565e
|
scientificName |
Phallusia nigra
|
AphiaID |
103725
|
eventDate |
2022-10-03
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
S78
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
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{
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{
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{
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{
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},
{
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}
]
}
|
organismQuantity |
49.0
|
id |
d4c896fa-98a3-44d8-a1dd-08f50d10f5ea
|
scientificName |
Phallusia nigra
|
AphiaID |
103725
|
eventDate |
2022-10-03
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
S75
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
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{
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{
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{
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{
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{
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}
]
}
|
organismQuantity |
1.0
|
id |
e4375802-533e-4e11-a51e-e3bf1d8bc072
|
scientificName |
Phallusia nigra
|
AphiaID |
103725
|
eventDate |
2022-10-03
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
S81
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
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{
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{
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{
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}
]
}
|
organismQuantity |
1.0
|
id |
452bd77b-f394-4463-ba1d-4bb3ff45b0e8
|
scientificName |
Phallusia nigra
|
AphiaID |
103725
|
eventDate |
2022-10-03
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
S80
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
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"confidence": 0.81
},
{
"method": "VSEARCH",
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},
{
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{
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{
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},
{
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}
]
}
|
organismQuantity |
178.0
|
id |
baf0d7fb-48ea-4f87-98ef-a549baebd9ab
|
scientificName |
Phallusia nigra
|
AphiaID |
103725
|
eventDate |
2022-10-03
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
S77
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"confidence": 0.81
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268455.1.1746_U",
"identity": 0.99,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268456.1.1746_U",
"identity": 0.99,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268457.1.1758_U",
"identity": 0.99,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268458.1.1766_U",
"identity": 0.99,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268459.1.1757_U",
"identity": 0.99,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
3.0
|
id |
22dc2501-09e9-4adc-a30c-5b3a91638184
|
scientificName |
Phallusia nigra
|
AphiaID |
103725
|
eventDate |
2022-10-03
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
S78
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"confidence": 0.81
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268455.1.1746_U",
"identity": 0.99,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268456.1.1746_U",
"identity": 0.99,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268457.1.1758_U",
"identity": 0.99,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268458.1.1766_U",
"identity": 0.99,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268459.1.1757_U",
"identity": 0.99,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
1.0
|
|