| Occurrences: |
view occurrences
| id |
311bbea0-8021-45a8-8fc1-7217013a66e6
|
| scientificName |
Microcosmus curvus
|
| AphiaID |
250843
|
| eventDate |
2022-10-03
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| materialSampleID |
S177
|
| target_gene |
COI
|
| DNA_sequence |
TTTAGCCGGTAATTTAGCCCACTCAAGAAGAGCTCTTGATTGTGCAATTTTTTCATTACATTTGGCCAGAATTTCCAGCATTTTAGGATCATTAAATTTTATGACAACAATATTTAATATAAAAACTAAAAGATGGGTTATATTTTCCATGCCTTTGTTTTGTTGAACTGTATTAGTAACTACTTTGTTGCTTTTACTTAGTCTTCCTGTTTTAGCTGCAGCTATTACTATATTACTTTTTGACCGAAATTTAAATACTTCATTTTTTGATCCTGTTAGAGGGAGAGATCCTGTTTTATATCAACACTTGTTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Microcosmus curvus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:250843",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Microcosmus curvus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:250843",
"accession": "KT693194",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Styela canopus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103926",
"accession": "MW278578",
"identity": 0.997,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
25.0
|
| id |
db2cee1c-b424-4a97-8dd8-d6ba1bfec49a
|
| scientificName |
Microcosmus curvus
|
| AphiaID |
250843
|
| eventDate |
2022-10-03
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| materialSampleID |
S170
|
| target_gene |
COI
|
| DNA_sequence |
TTTAGCCGGTAATTTAGCCCACTCAAGAAGAGCTCTTGATTGTGCAATTTTTTCATTACATTTGGCCAGAATTTCCAGCATTTTAGGATCATTAAATTTTATGACAACAATATTTAATATAAAAACTAAAAGATGGGTTATATTTTCCATGCCTTTGTTTTGTTGAACTGTATTAGTAACTACTTTGTTGCTTTTACTTAGTCTTCCTGTTTTAGCTGCAGCTATTACTATATTACTTTTTGACCGAAATTTAAATACTTCATTTTTTGATCCTGTTAGAGGGAGAGATCCTGTTTTATATCAACACTTGTTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Microcosmus curvus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:250843",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Microcosmus curvus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:250843",
"accession": "KT693194",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Styela canopus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103926",
"accession": "MW278578",
"identity": 0.997,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
9.0
|
|