| Occurrences: |
view occurrences
| id |
92502afd-07b2-4f3c-9d98-34a9c4509860
|
| scientificName |
Apionsoma (Apionsoma) misakianum
|
| AphiaID |
266492
|
| eventDate |
2022-11-23
|
| decimalLongitude |
178.425933
|
| decimalLatitude |
-18.1293
|
| materialSampleID |
S72
|
| target_gene |
18S
|
| DNA_sequence |
TGTTGGTTTTCGGAGCCCGAGGTAATGATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGGTGTTAGAGGTGAAATTCTTGGATCATCGCAAGACGAACAACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCAGAGGTTCG
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Apionsoma misakianum",
"confidence": 0.93
},
{
"method": "VSEARCH",
"scientificName": "Apionsoma_misakianum",
"accession": "AY210440.1.1815_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Apionsoma_misakianum",
"accession": "DQ299952.1.1769_U",
"identity": 1,
"query_cover": 0.9938
}
]
}
|
| organismQuantity |
7.0
|
| id |
74f2b610-5131-4366-8593-33bcf6bb6e23
|
| scientificName |
Apionsoma (Apionsoma) misakianum
|
| AphiaID |
266492
|
| eventDate |
2022-11-23
|
| decimalLongitude |
178.425933
|
| decimalLatitude |
-18.1293
|
| materialSampleID |
S88
|
| target_gene |
18S
|
| DNA_sequence |
TGTTGGTTTTCGGAGCCCGAGGTAATGATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGGTGTTAGAGGTGAAATTCTTGGATCATCGCAAGACGAACAACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCAGAGGTTCG
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Apionsoma misakianum",
"confidence": 0.93
},
{
"method": "VSEARCH",
"scientificName": "Apionsoma_misakianum",
"accession": "AY210440.1.1815_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Apionsoma_misakianum",
"accession": "DQ299952.1.1769_U",
"identity": 1,
"query_cover": 0.9938
}
]
}
|
| organismQuantity |
1.0
|
|