PacMAN decision support system

Potential detection of Dendostrea sandvichensis in Fiji

Description:

Potential detection of Dendostrea sandvichensis with confidence low on 2022-11-23 in material sample S166, marker COI

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Dendostrea sandvichensis
Mollusca > Bivalvia > Ostreida > Ostreidae
WoRMS: 506713

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

Reads:

170.0

Names:

Occurrences:

view occurrences

id	e8b5bd10-c7d1-445a-8992-6a06c00394c0
scientificName	Dendostrea sandvichensis
AphiaID	506713
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S166
target_gene	COI
DNA_sequence	TTTATCTACTTTCTCATATCATGGAATGTGTATGGACTTGGCTATTTTGAGGCTTCACTTAGCTGGTATTAGATCAATTTTTAGATCAATTAACTTCATGGTAACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGATCTATTAAAGTGACCTCATTTTTATTACTTACGACTCTTCCAGTATTGGCTGGTGGGCTGACTATGTTACTGACGGATCGACATTTTAATACTTCTTTCTTTGATCCGGTAGGGGGTGGTGATCCGGTCTTATTTCAGCATTTATTC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Dendostrea crenulifera", "scientificNameID": "urn:lsid:marinespecies.org:taxname:244714", "confidence": 1 } ] }
organismQuantity	170.0

id	8ec76067-8fdf-4aa5-9b6a-2ea2ec728483
scientificName	Dendostrea sandvichensis
AphiaID	506713
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S166
target_gene	COI
DNA_sequence	TTTGTCTACTTTCTCATATCACGGAATGTGCATGGATTTGGCCATTTTAAGACTTCATTTAGCCGGAATTAGATCAATTTTTAGGTCAATTAACTTTGTAGTAACAATTACTAATATACGGTCAGTAGATGGCCACTTGTTAGCTTTATTTCCTTGGTCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTCTTAGCTGGTGGGTTAACTATGTTACTGACAGATCGACATTTTAACACTTCTTTCTTTGACCCAGTAGGGGGTGGTGATCCGGTTTTATTCCAGCATTTATTC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Dendostrea crenulifera", "scientificNameID": "urn:lsid:marinespecies.org:taxname:244714", "confidence": 0.81 } ] }
organismQuantity	29.0

id	e475640b-22e7-4335-b73c-a5d02e77f6a1
scientificName	Dendostrea sandvichensis
AphiaID	506713
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S160
target_gene	COI
DNA_sequence	TTTGTCTACTTTCTCATATCACGGAATGTGCATGGATTTGGCCATTTTAAGACTTCATTTAGCCGGAATTAGATCAATTTTTAGGTCAATTAACTTTGTAGTAACAATTACTAATATACGGTCAGTAGATGGCCACTTGTTAGCTTTATTTCCTTGGTCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTCTTAGCTGGTGGGTTAACTATGTTACTGACAGATCGACATTTTAACACTTCTTTCTTTGACCCAGTAGGGGGTGGTGATCCGGTTTTATTCCAGCATTTATTC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Dendostrea crenulifera", "scientificNameID": "urn:lsid:marinespecies.org:taxname:244714", "confidence": 0.81 } ] }
organismQuantity	25.0

id	fcfb614d-0c3c-416c-8400-0565867e829f
scientificName	Dendostrea sandvichensis
AphiaID	506713
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S160
target_gene	COI
DNA_sequence	TTTATCTACTTTCTCATATCATGGAATGTGTATGGACTTGGCTATTTTGAGGCTTCACTTAGCTGGTATTAGATCAATTTTTAGATCAATTAACTTCATGGTAACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGATCTATTAAAGTGACCTCATTTTTATTACTTACGACTCTTCCAGTATTGGCTGGTGGGCTGACTATGTTACTGACGGATCGACATTTTAATACTTCTTTCTTTGATCCGGTAGGGGGTGGTGATCCGGTCTTATTTCAGCATTTATTC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Dendostrea crenulifera", "scientificNameID": "urn:lsid:marinespecies.org:taxname:244714", "confidence": 1 } ] }
organismQuantity	7.0

id	e3f12a10-4246-45d9-884e-fb8b112141b6
scientificName	Dendostrea sandvichensis
AphiaID	506713
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S163
target_gene	COI
DNA_sequence	TTTGTCTACTTTCTCATATCACGGAATGTGCATGGATTTGGCCATTTTAAGACTTCATTTAGCCGGAATTAGATCAATTTTTAGGTCAATTAACTTTGTAGTAACAATTACTAATATACGGTCAGTAGATGGCCACTTGTTAGCTTTATTTCCTTGGTCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTCTTAGCTGGTGGGTTAACTATGTTACTGACAGATCGACATTTTAACACTTCTTTCTTTGACCCAGTAGGGGGTGGTGATCCGGTTTTATTCCAGCATTTATTC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Dendostrea crenulifera", "scientificNameID": "urn:lsid:marinespecies.org:taxname:244714", "confidence": 0.81 } ] }
organismQuantity	4.0

id	a8fd030b-25d1-4e87-8538-477364c5ce73
scientificName	Dendostrea sandvichensis
AphiaID	506713
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S161
target_gene	COI
DNA_sequence	TTTATCTACTTTCTCATATCATGGAATGTGCATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATCTTTAGGTCAATTAACTTTATGGTGACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGATCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTATTGGCTGGTGGGTTGACTATGTTACTGACGGACCGACATTTTAATACTTCTTTCTTCGATCCGGTAGGAGGTGGTGATCCGGTCTTATTTCAGCATTTATTC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Dendostrea crenulifera", "scientificNameID": "urn:lsid:marinespecies.org:taxname:244714", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Dendostrea crenulifera", "scientificNameID": "urn:lsid:marinespecies.org:taxname:244714", "accession": "KC683510", "identity": 0.977, "query_cover": 0.9967 }, { "method": "VSEARCH", "scientificName": "Dendostrea crenulifera", "scientificNameID": "urn:lsid:marinespecies.org:taxname:244714", "accession": "KC683511", "identity": 0.977, "query_cover": 0.9967 } ] }
organismQuantity	3.0

Dendostrea sandvichensis does not have an offial status in Fiji.

No notes found.